mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8hjjojrc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:36:51,576 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:36:52,390 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:36:52,571 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:37:39,439 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:37:39,533 - cnv_pipe.batch.run_model - INFO - Processing cluster 681 with 189 probes
2026-06-03 05:37:39,930 - cnv_pipe.batch.run_model.cluster681 - INFO - Child process started for cluster 681 with 189 probes
2026-06-03 05:43:25,005 - cnv_pipe.batch.run_model.cluster681 - INFO - Child process finished cluster 681. Wrote cluster_681_samples.csv and cluster_681_params.csv
2026-06-03 05:43:25,009 - cnv_pipe.batch.run_model - INFO - Cluster 681 finished in 345.48 seconds. Status: SUCCESS