File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/9feb35cba14ab2da3fde7749603882/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wp2y7ule because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:57,721 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:58,528 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:58,697 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:45,305 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:45,404 - cnv_pipe.batch.run_model - INFO - Processing cluster 831 with 174 probes
2026-06-03 05:35:45,994 - cnv_pipe.batch.run_model.cluster831 - INFO - Child process started for cluster 831 with 174 probes
2026-06-03 05:41:15,198 - cnv_pipe.batch.run_model.cluster831 - INFO - Child process finished cluster 831. Wrote cluster_831_samples.csv and cluster_831_params.csv
2026-06-03 05:41:15,202 - cnv_pipe.batch.run_model - INFO - Cluster 831 finished in 329.80 seconds. Status: SUCCESS