mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-m5ansx50 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:44,464 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:45,625 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:45,844 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:40,330 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:40,643 - cnv_pipe.batch.run_model - INFO - Processing cluster 889 with 198 probes
2026-06-03 05:35:41,125 - cnv_pipe.batch.run_model.cluster889 - INFO - Child process started for cluster 889 with 198 probes
2026-06-03 05:41:44,447 - cnv_pipe.batch.run_model.cluster889 - INFO - Child process finished cluster 889. Wrote cluster_889_samples.csv and cluster_889_params.csv
2026-06-03 05:41:44,452 - cnv_pipe.batch.run_model - INFO - Cluster 889 finished in 363.81 seconds. Status: SUCCESS