File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/d3a49b770a3b7570cdeb63e9943113/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oc4m41gl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:22,178 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:23,237 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:23,436 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:15,388 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:15,509 - cnv_pipe.batch.run_model - INFO - Processing cluster 805 with 192 probes
2026-06-03 05:35:16,017 - cnv_pipe.batch.run_model.cluster805 - INFO - Child process started for cluster 805 with 192 probes
2026-06-03 05:41:03,189 - cnv_pipe.batch.run_model.cluster805 - INFO - Child process finished cluster 805. Wrote cluster_805_samples.csv and cluster_805_params.csv
2026-06-03 05:41:03,192 - cnv_pipe.batch.run_model - INFO - Cluster 805 finished in 347.68 seconds. Status: SUCCESS