mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uywbyn_i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:57,466 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:58,554 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:58,756 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:50,274 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:50,374 - cnv_pipe.batch.run_model - INFO - Processing cluster 654 with 151 probes
2026-06-03 05:35:50,860 - cnv_pipe.batch.run_model.cluster654 - INFO - Child process started for cluster 654 with 151 probes
2026-06-03 05:40:52,030 - cnv_pipe.batch.run_model.cluster654 - INFO - Child process finished cluster 654. Wrote cluster_654_samples.csv and cluster_654_params.csv
2026-06-03 05:40:52,033 - cnv_pipe.batch.run_model - INFO - Cluster 654 finished in 301.66 seconds. Status: SUCCESS