mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nvc5rbxj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:46,947 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:48,161 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:48,392 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:44,139 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:44,513 - cnv_pipe.batch.run_model - INFO - Processing cluster 897 with 200 probes
2026-06-03 05:35:45,033 - cnv_pipe.batch.run_model.cluster897 - INFO - Child process started for cluster 897 with 200 probes
2026-06-03 05:41:54,155 - cnv_pipe.batch.run_model.cluster897 - INFO - Child process finished cluster 897. Wrote cluster_897_samples.csv and cluster_897_params.csv
2026-06-03 05:41:54,160 - cnv_pipe.batch.run_model - INFO - Cluster 897 finished in 369.65 seconds. Status: SUCCESS