mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yntkad_i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:36:06,830 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:36:08,275 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:36:08,568 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:37:14,670 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:37:14,964 - cnv_pipe.batch.run_model - INFO - Processing cluster 997 with 191 probes
2026-06-03 05:37:15,597 - cnv_pipe.batch.run_model.cluster997 - INFO - Child process started for cluster 997 with 191 probes
2026-06-03 05:47:10,874 - cnv_pipe.batch.run_model.cluster997 - INFO - Child process finished cluster 997. Wrote cluster_997_samples.csv and cluster_997_params.csv
2026-06-03 05:47:10,878 - cnv_pipe.batch.run_model - INFO - Cluster 997 finished in 595.91 seconds. Status: SUCCESS