File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/e3bf61b45c75a1efe70ab4e222d49b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8ohb9ytp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:21,704 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:22,842 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:23,048 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:16,827 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:17,178 - cnv_pipe.batch.run_model - INFO - Processing cluster 796 with 188 probes
2026-06-03 05:35:17,679 - cnv_pipe.batch.run_model.cluster796 - INFO - Child process started for cluster 796 with 188 probes
2026-06-03 05:41:11,224 - cnv_pipe.batch.run_model.cluster796 - INFO - Child process finished cluster 796. Wrote cluster_796_samples.csv and cluster_796_params.csv
2026-06-03 05:41:11,228 - cnv_pipe.batch.run_model - INFO - Cluster 796 finished in 354.05 seconds. Status: SUCCESS