File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/dc063743cefad5491c031aa7de6755/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9ney2iut because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:35:26,261 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:27,363 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:27,565 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:36:20,897 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:36:21,246 - cnv_pipe.batch.run_model - INFO - Processing cluster 1044 with 186 probes
2026-06-03 05:36:21,759 - cnv_pipe.batch.run_model.cluster1044 - INFO - Child process started for cluster 1044 with 186 probes
2026-06-03 05:42:08,090 - cnv_pipe.batch.run_model.cluster1044 - INFO - Child process finished cluster 1044. Wrote cluster_1044_samples.csv and cluster_1044_params.csv
2026-06-03 05:42:08,094 - cnv_pipe.batch.run_model - INFO - Cluster 1044 finished in 346.85 seconds. Status: SUCCESS