mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2qp_qzr4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:51,830 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:52,640 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:52,813 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:40,782 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:41,058 - cnv_pipe.batch.run_model - INFO - Processing cluster 862 with 190 probes
2026-06-03 05:35:41,448 - cnv_pipe.batch.run_model.cluster862 - INFO - Child process started for cluster 862 with 190 probes
2026-06-03 05:41:34,768 - cnv_pipe.batch.run_model.cluster862 - INFO - Child process finished cluster 862. Wrote cluster_862_samples.csv and cluster_862_params.csv
2026-06-03 05:41:34,771 - cnv_pipe.batch.run_model - INFO - Cluster 862 finished in 353.71 seconds. Status: SUCCESS