File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/4bd780d501888358d4d9c1b8263e67/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mj_g98bt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:38,854 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:40,041 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:40,265 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:35,013 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:35,377 - cnv_pipe.batch.run_model - INFO - Processing cluster 869 with 182 probes
2026-06-03 05:35:35,925 - cnv_pipe.batch.run_model.cluster869 - INFO - Child process started for cluster 869 with 182 probes
2026-06-03 05:41:06,655 - cnv_pipe.batch.run_model.cluster869 - INFO - Child process finished cluster 869. Wrote cluster_869_samples.csv and cluster_869_params.csv
2026-06-03 05:41:06,658 - cnv_pipe.batch.run_model - INFO - Cluster 869 finished in 331.28 seconds. Status: SUCCESS