mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pr2dg2o4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:35:44,392 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:45,481 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:45,689 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:36:37,523 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:36:37,669 - cnv_pipe.batch.run_model - INFO - Processing cluster 1025 with 190 probes
2026-06-03 05:36:38,429 - cnv_pipe.batch.run_model.cluster1025 - INFO - Child process started for cluster 1025 with 190 probes
2026-06-03 05:42:23,364 - cnv_pipe.batch.run_model.cluster1025 - INFO - Child process finished cluster 1025. Wrote cluster_1025_samples.csv and cluster_1025_params.csv
2026-06-03 05:42:23,366 - cnv_pipe.batch.run_model - INFO - Cluster 1025 finished in 345.70 seconds. Status: SUCCESS