mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-336g6q5l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:30:59,153 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:31:00,105 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:31:00,288 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:31:49,257 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:31:49,541 - cnv_pipe.batch.run_model - INFO - Processing cluster 68 with 184 probes
2026-06-03 05:31:50,031 - cnv_pipe.batch.run_model.cluster68 - INFO - Child process started for cluster 68 with 184 probes
2026-06-03 05:37:35,973 - cnv_pipe.batch.run_model.cluster68 - INFO - Child process finished cluster 68. Wrote cluster_68_samples.csv and cluster_68_params.csv
2026-06-03 05:37:35,977 - cnv_pipe.batch.run_model - INFO - Cluster 68 finished in 346.44 seconds. Status: SUCCESS