mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t3i54n1m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:59,624 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:00,688 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:00,890 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:52,200 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:52,543 - cnv_pipe.batch.run_model - INFO - Processing cluster 942 with 171 probes
2026-06-03 05:35:53,064 - cnv_pipe.batch.run_model.cluster942 - INFO - Child process started for cluster 942 with 171 probes
2026-06-03 05:41:20,490 - cnv_pipe.batch.run_model.cluster942 - INFO - Child process finished cluster 942. Wrote cluster_942_samples.csv and cluster_942_params.csv
2026-06-03 05:41:20,494 - cnv_pipe.batch.run_model - INFO - Cluster 942 finished in 327.95 seconds. Status: SUCCESS