mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nccr86hp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:52,603 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:53,419 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:53,621 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:39,778 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:39,865 - cnv_pipe.batch.run_model - INFO - Processing cluster 877 with 192 probes
2026-06-03 05:35:40,241 - cnv_pipe.batch.run_model.cluster877 - INFO - Child process started for cluster 877 with 192 probes
2026-06-03 05:41:29,574 - cnv_pipe.batch.run_model.cluster877 - INFO - Child process finished cluster 877. Wrote cluster_877_samples.csv and cluster_877_params.csv
2026-06-03 05:41:29,579 - cnv_pipe.batch.run_model - INFO - Cluster 877 finished in 349.71 seconds. Status: SUCCESS