mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0in54eix because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:58,266 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:59,072 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:59,252 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:44,829 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:45,097 - cnv_pipe.batch.run_model - INFO - Processing cluster 658 with 192 probes
2026-06-03 05:35:45,507 - cnv_pipe.batch.run_model.cluster658 - INFO - Child process started for cluster 658 with 192 probes
2026-06-03 05:41:31,083 - cnv_pipe.batch.run_model.cluster658 - INFO - Child process finished cluster 658. Wrote cluster_658_samples.csv and cluster_658_params.csv
2026-06-03 05:41:31,086 - cnv_pipe.batch.run_model - INFO - Cluster 658 finished in 345.99 seconds. Status: SUCCESS