mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3vbg6k49 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:50,267 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:51,354 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:51,553 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:41,612 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:41,922 - cnv_pipe.batch.run_model - INFO - Processing cluster 764 with 139 probes
2026-06-03 05:35:42,411 - cnv_pipe.batch.run_model.cluster764 - INFO - Child process started for cluster 764 with 139 probes
2026-06-03 05:40:16,250 - cnv_pipe.batch.run_model.cluster764 - INFO - Child process finished cluster 764. Wrote cluster_764_samples.csv and cluster_764_params.csv
2026-06-03 05:40:16,253 - cnv_pipe.batch.run_model - INFO - Cluster 764 finished in 274.33 seconds. Status: SUCCESS