mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-59enztrs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:32,194 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:33,276 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:33,477 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:25,097 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:25,395 - cnv_pipe.batch.run_model - INFO - Processing cluster 844 with 200 probes
2026-06-03 05:35:25,885 - cnv_pipe.batch.run_model.cluster844 - INFO - Child process started for cluster 844 with 200 probes
2026-06-03 05:41:24,536 - cnv_pipe.batch.run_model.cluster844 - INFO - Child process finished cluster 844. Wrote cluster_844_samples.csv and cluster_844_params.csv
2026-06-03 05:41:24,539 - cnv_pipe.batch.run_model - INFO - Cluster 844 finished in 359.14 seconds. Status: SUCCESS