mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2a2nemed because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:30:43,941 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:30:44,973 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:30:45,172 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:31:36,262 - cnv_pipe.batch.run_model - INFO - Loaded data with 190 samples
2026-06-03 05:31:36,379 - cnv_pipe.batch.run_model - INFO - Processing cluster 695 with 196 probes
2026-06-03 05:31:37,041 - cnv_pipe.batch.run_model.cluster695 - INFO - Child process started for cluster 695 with 196 probes
2026-06-03 05:37:31,229 - cnv_pipe.batch.run_model.cluster695 - INFO - Child process finished cluster 695. Wrote cluster_695_samples.csv and cluster_695_params.csv
2026-06-03 05:37:31,232 - cnv_pipe.batch.run_model - INFO - Cluster 695 finished in 354.85 seconds. Status: SUCCESS