mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yufi4g2v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:31:43,499 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:31:44,494 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:31:44,695 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:32:36,397 - cnv_pipe.batch.run_model - INFO - Loaded data with 190 samples
2026-06-03 05:32:36,727 - cnv_pipe.batch.run_model - INFO - Processing cluster 905 with 176 probes
2026-06-03 05:32:37,228 - cnv_pipe.batch.run_model.cluster905 - INFO - Child process started for cluster 905 with 176 probes
2026-06-03 05:37:56,986 - cnv_pipe.batch.run_model.cluster905 - INFO - Child process finished cluster 905. Wrote cluster_905_samples.csv and cluster_905_params.csv
2026-06-03 05:37:56,990 - cnv_pipe.batch.run_model - INFO - Cluster 905 finished in 320.26 seconds. Status: SUCCESS