File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/00a16381fe02ea6dc179a86d76095e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-30_qgsfv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:32:41,535 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:32:42,640 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:32:42,833 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:33:36,000 - cnv_pipe.batch.run_model - INFO - Loaded data with 190 samples
2026-06-03 05:33:36,351 - cnv_pipe.batch.run_model - INFO - Processing cluster 1091 with 188 probes
2026-06-03 05:33:36,863 - cnv_pipe.batch.run_model.cluster1091 - INFO - Child process started for cluster 1091 with 188 probes
2026-06-03 05:39:29,918 - cnv_pipe.batch.run_model.cluster1091 - INFO - Child process finished cluster 1091. Wrote cluster_1091_samples.csv and cluster_1091_params.csv
2026-06-03 05:39:29,922 - cnv_pipe.batch.run_model - INFO - Cluster 1091 finished in 353.57 seconds. Status: SUCCESS