File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/e7209c612bd271b0d11aaeaa3fb9ad/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ajkb_c0x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:31:56,132 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:31:57,504 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:31:57,737 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:33:04,382 - cnv_pipe.batch.run_model - INFO - Loaded data with 190 samples
2026-06-03 05:33:04,518 - cnv_pipe.batch.run_model - INFO - Processing cluster 933 with 198 probes
2026-06-03 05:33:05,356 - cnv_pipe.batch.run_model.cluster933 - INFO - Child process started for cluster 933 with 198 probes
2026-06-03 05:41:13,242 - cnv_pipe.batch.run_model.cluster933 - INFO - Child process finished cluster 933. Wrote cluster_933_samples.csv and cluster_933_params.csv
2026-06-03 05:41:13,247 - cnv_pipe.batch.run_model - INFO - Cluster 933 finished in 488.73 seconds. Status: SUCCESS