File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/66923ebc001e51347f53ea200bb858/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ridg0ey2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:12,414 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:13,304 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:13,484 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:57,616 - cnv_pipe.batch.run_model - INFO - Loaded data with 190 samples
2026-06-03 05:28:57,835 - cnv_pipe.batch.run_model - INFO - Processing cluster 98 with 186 probes
2026-06-03 05:28:58,249 - cnv_pipe.batch.run_model.cluster98 - INFO - Child process started for cluster 98 with 186 probes
2026-06-03 05:34:20,677 - cnv_pipe.batch.run_model.cluster98 - INFO - Child process finished cluster 98. Wrote cluster_98_samples.csv and cluster_98_params.csv
2026-06-03 05:34:20,680 - cnv_pipe.batch.run_model - INFO - Cluster 98 finished in 322.85 seconds. Status: SUCCESS