mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2w0a81gu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:31:36,240 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:31:37,320 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:31:37,531 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:32:32,829 - cnv_pipe.batch.run_model - INFO - Loaded data with 190 samples
2026-06-03 05:32:33,183 - cnv_pipe.batch.run_model - INFO - Processing cluster 879 with 197 probes
2026-06-03 05:32:33,689 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process started for cluster 879 with 197 probes
2026-06-03 05:39:02,437 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process finished cluster 879. Wrote cluster_879_samples.csv and cluster_879_params.csv
2026-06-03 05:39:02,441 - cnv_pipe.batch.run_model - INFO - Cluster 879 finished in 389.26 seconds. Status: SUCCESS