mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bkrx3cm0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:37:35,738 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:37:36,776 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:37:36,977 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:31,575 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:31,700 - cnv_pipe.batch.run_model - INFO - Processing cluster 495 with 179 probes
2026-06-03 05:38:32,220 - cnv_pipe.batch.run_model.cluster495 - INFO - Child process started for cluster 495 with 179 probes
2026-06-03 05:46:37,366 - cnv_pipe.batch.run_model.cluster495 - INFO - Child process finished cluster 495. Wrote cluster_495_samples.csv and cluster_495_params.csv
2026-06-03 05:46:37,368 - cnv_pipe.batch.run_model - INFO - Cluster 495 finished in 485.67 seconds. Status: SUCCESS