mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-scg2ehkz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:37:16,309 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:37:17,427 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:37:17,632 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:09,790 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:10,147 - cnv_pipe.batch.run_model - INFO - Processing cluster 548 with 197 probes
2026-06-03 05:38:10,671 - cnv_pipe.batch.run_model.cluster548 - INFO - Child process started for cluster 548 with 197 probes
2026-06-03 05:43:52,995 - cnv_pipe.batch.run_model.cluster548 - INFO - Child process finished cluster 548. Wrote cluster_548_samples.csv and cluster_548_params.csv
2026-06-03 05:43:52,997 - cnv_pipe.batch.run_model - INFO - Cluster 548 finished in 342.85 seconds. Status: SUCCESS