mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-26uvtf0i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:53,403 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:54,486 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:54,694 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:45,498 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:45,839 - cnv_pipe.batch.run_model - INFO - Processing cluster 946 with 185 probes
2026-06-03 05:39:46,319 - cnv_pipe.batch.run_model.cluster946 - INFO - Child process started for cluster 946 with 185 probes
2026-06-03 05:45:46,422 - cnv_pipe.batch.run_model.cluster946 - INFO - Child process finished cluster 946. Wrote cluster_946_samples.csv and cluster_946_params.csv
2026-06-03 05:45:46,425 - cnv_pipe.batch.run_model - INFO - Cluster 946 finished in 360.59 seconds. Status: SUCCESS