File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/34d50b503248c674ca3b5636c0e700/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n_xphvqq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:08,170 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:09,015 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:09,185 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:55,554 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:55,884 - cnv_pipe.batch.run_model - INFO - Processing cluster 715 with 185 probes
2026-06-03 05:38:56,285 - cnv_pipe.batch.run_model.cluster715 - INFO - Child process started for cluster 715 with 185 probes
2026-06-03 05:44:44,989 - cnv_pipe.batch.run_model.cluster715 - INFO - Child process finished cluster 715. Wrote cluster_715_samples.csv and cluster_715_params.csv
2026-06-03 05:44:44,992 - cnv_pipe.batch.run_model - INFO - Cluster 715 finished in 349.11 seconds. Status: SUCCESS