mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g3u2j0bg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:10,721 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:11,773 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:11,998 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:04,264 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:04,633 - cnv_pipe.batch.run_model - INFO - Processing cluster 786 with 197 probes
2026-06-03 05:39:05,135 - cnv_pipe.batch.run_model.cluster786 - INFO - Child process started for cluster 786 with 197 probes
2026-06-03 05:44:50,173 - cnv_pipe.batch.run_model.cluster786 - INFO - Child process finished cluster 786. Wrote cluster_786_samples.csv and cluster_786_params.csv
2026-06-03 05:44:50,175 - cnv_pipe.batch.run_model - INFO - Cluster 786 finished in 345.54 seconds. Status: SUCCESS