File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/fb4ce113c3d27d58605024cc22275f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-10gtj2j9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:39:41,425 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:39:42,559 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:39:42,770 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:40:34,521 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:40:34,831 - cnv_pipe.batch.run_model - INFO - Processing cluster 1151 with 186 probes
2026-06-03 05:40:35,309 - cnv_pipe.batch.run_model.cluster1151 - INFO - Child process started for cluster 1151 with 186 probes
2026-06-03 05:45:58,197 - cnv_pipe.batch.run_model.cluster1151 - INFO - Child process finished cluster 1151. Wrote cluster_1151_samples.csv and cluster_1151_params.csv
2026-06-03 05:45:58,199 - cnv_pipe.batch.run_model - INFO - Cluster 1151 finished in 323.37 seconds. Status: SUCCESS