mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-amp5uaxj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:30,014 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:31,056 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:31,263 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:22,747 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:23,000 - cnv_pipe.batch.run_model - INFO - Processing cluster 685 with 175 probes
2026-06-03 05:39:23,502 - cnv_pipe.batch.run_model.cluster685 - INFO - Child process started for cluster 685 with 175 probes
2026-06-03 05:46:34,572 - cnv_pipe.batch.run_model.cluster685 - INFO - Child process finished cluster 685. Wrote cluster_685_samples.csv and cluster_685_params.csv
2026-06-03 05:46:34,579 - cnv_pipe.batch.run_model - INFO - Cluster 685 finished in 431.58 seconds. Status: SUCCESS