mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zla54rmd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:49,507 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:50,729 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:50,942 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:44,662 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:44,787 - cnv_pipe.batch.run_model - INFO - Processing cluster 929 with 193 probes
2026-06-03 05:39:45,559 - cnv_pipe.batch.run_model.cluster929 - INFO - Child process started for cluster 929 with 193 probes
2026-06-03 05:45:31,668 - cnv_pipe.batch.run_model.cluster929 - INFO - Child process finished cluster 929. Wrote cluster_929_samples.csv and cluster_929_params.csv
2026-06-03 05:45:31,670 - cnv_pipe.batch.run_model - INFO - Cluster 929 finished in 346.88 seconds. Status: SUCCESS