mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3onjkc01 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:52,839 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:53,971 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:54,165 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:46,100 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:46,475 - cnv_pipe.batch.run_model - INFO - Processing cluster 944 with 162 probes
2026-06-03 05:39:47,021 - cnv_pipe.batch.run_model.cluster944 - INFO - Child process started for cluster 944 with 162 probes
2026-06-03 05:44:39,650 - cnv_pipe.batch.run_model.cluster944 - INFO - Child process finished cluster 944. Wrote cluster_944_samples.csv and cluster_944_params.csv
2026-06-03 05:44:39,653 - cnv_pipe.batch.run_model - INFO - Cluster 944 finished in 293.18 seconds. Status: SUCCESS