mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t586xn8b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:12,446 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:13,709 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:13,927 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:06,733 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:07,041 - cnv_pipe.batch.run_model - INFO - Processing cluster 787 with 175 probes
2026-06-03 05:39:07,565 - cnv_pipe.batch.run_model.cluster787 - INFO - Child process started for cluster 787 with 175 probes
2026-06-03 05:44:21,324 - cnv_pipe.batch.run_model.cluster787 - INFO - Child process finished cluster 787. Wrote cluster_787_samples.csv and cluster_787_params.csv
2026-06-03 05:44:21,327 - cnv_pipe.batch.run_model - INFO - Cluster 787 finished in 314.29 seconds. Status: SUCCESS