mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-itmbnfj6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:37:23,756 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:37:24,544 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:37:24,711 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:10,250 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:10,493 - cnv_pipe.batch.run_model - INFO - Processing cluster 559 with 97 probes
2026-06-03 05:38:10,874 - cnv_pipe.batch.run_model.cluster559 - INFO - Child process started for cluster 559 with 97 probes
2026-06-03 05:41:04,567 - cnv_pipe.batch.run_model.cluster559 - INFO - Child process finished cluster 559. Wrote cluster_559_samples.csv and cluster_559_params.csv
2026-06-03 05:41:04,569 - cnv_pipe.batch.run_model - INFO - Cluster 559 finished in 174.08 seconds. Status: SUCCESS