mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dyxjoxaa because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:30,470 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:31,287 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:31,467 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:18,341 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:18,574 - cnv_pipe.batch.run_model - INFO - Processing cluster 650 with 141 probes
2026-06-03 05:39:18,979 - cnv_pipe.batch.run_model.cluster650 - INFO - Child process started for cluster 650 with 141 probes
2026-06-03 05:43:53,966 - cnv_pipe.batch.run_model.cluster650 - INFO - Child process finished cluster 650. Wrote cluster_650_samples.csv and cluster_650_params.csv
2026-06-03 05:43:53,968 - cnv_pipe.batch.run_model - INFO - Cluster 650 finished in 275.39 seconds. Status: SUCCESS