mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bkf0f0dw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:37:21,767 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:37:22,941 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:37:23,154 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:18,858 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:19,248 - cnv_pipe.batch.run_model - INFO - Processing cluster 574 with 127 probes
2026-06-03 05:38:19,801 - cnv_pipe.batch.run_model.cluster574 - INFO - Child process started for cluster 574 with 127 probes
2026-06-03 05:42:53,205 - cnv_pipe.batch.run_model.cluster574 - INFO - Child process finished cluster 574. Wrote cluster_574_samples.csv and cluster_574_params.csv
2026-06-03 05:42:53,209 - cnv_pipe.batch.run_model - INFO - Cluster 574 finished in 273.96 seconds. Status: SUCCESS