File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/b8ae7376a1b585d001a8d3912e5cb6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r54_6w81 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:53:18,813 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:53:19,631 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:53:19,797 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:54:00,719 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:54:00,926 - cnv_pipe.batch.run_model - INFO - Processing cluster 2602 with 192 probes
2026-06-03 05:54:01,307 - cnv_pipe.batch.run_model.cluster2602 - INFO - Child process started for cluster 2602 with 192 probes
2026-06-03 05:58:25,762 - cnv_pipe.batch.run_model.cluster2602 - INFO - Child process finished cluster 2602. Wrote cluster_2602_samples.csv and cluster_2602_params.csv
2026-06-03 05:58:25,764 - cnv_pipe.batch.run_model - INFO - Cluster 2602 finished in 264.84 seconds. Status: SUCCESS