mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xrn7d_3q because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:04,431 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:05,226 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:05,403 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:52,823 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:52,924 - cnv_pipe.batch.run_model - INFO - Processing cluster 533 with 197 probes
2026-06-03 05:38:53,458 - cnv_pipe.batch.run_model.cluster533 - INFO - Child process started for cluster 533 with 197 probes
2026-06-03 05:44:51,906 - cnv_pipe.batch.run_model.cluster533 - INFO - Child process finished cluster 533. Wrote cluster_533_samples.csv and cluster_533_params.csv
2026-06-03 05:44:51,909 - cnv_pipe.batch.run_model - INFO - Cluster 533 finished in 358.98 seconds. Status: SUCCESS