mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-69v4u3hy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:35,200 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:36,250 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:36,450 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:26,087 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:26,346 - cnv_pipe.batch.run_model - INFO - Processing cluster 839 with 200 probes
2026-06-03 05:39:26,931 - cnv_pipe.batch.run_model.cluster839 - INFO - Child process started for cluster 839 with 200 probes
2026-06-03 05:47:39,007 - cnv_pipe.batch.run_model.cluster839 - INFO - Child process finished cluster 839. Wrote cluster_839_samples.csv and cluster_839_params.csv
2026-06-03 05:47:39,010 - cnv_pipe.batch.run_model - INFO - Cluster 839 finished in 492.66 seconds. Status: SUCCESS