File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/0a7255e1bc03f8406ad2bde993bf90/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8x5n7w1s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:28,430 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:29,294 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:29,475 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:15,365 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:15,467 - cnv_pipe.batch.run_model - INFO - Processing cluster 809 with 199 probes
2026-06-03 05:39:15,889 - cnv_pipe.batch.run_model.cluster809 - INFO - Child process started for cluster 809 with 199 probes
2026-06-03 05:45:11,255 - cnv_pipe.batch.run_model.cluster809 - INFO - Child process finished cluster 809. Wrote cluster_809_samples.csv and cluster_809_params.csv
2026-06-03 05:45:11,257 - cnv_pipe.batch.run_model - INFO - Cluster 809 finished in 355.79 seconds. Status: SUCCESS