mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-499_cxbi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:37:24,524 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:37:25,601 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:37:25,805 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:16,638 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:16,973 - cnv_pipe.batch.run_model - INFO - Processing cluster 528 with 165 probes
2026-06-03 05:38:17,497 - cnv_pipe.batch.run_model.cluster528 - INFO - Child process started for cluster 528 with 165 probes
2026-06-03 05:43:17,682 - cnv_pipe.batch.run_model.cluster528 - INFO - Child process finished cluster 528. Wrote cluster_528_samples.csv and cluster_528_params.csv
2026-06-03 05:43:17,685 - cnv_pipe.batch.run_model - INFO - Cluster 528 finished in 300.71 seconds. Status: SUCCESS