mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gf6vf8lw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:39:39,075 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:39:40,187 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:39:40,416 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:40:32,160 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:40:32,268 - cnv_pipe.batch.run_model - INFO - Processing cluster 1022 with 175 probes
2026-06-03 05:40:32,949 - cnv_pipe.batch.run_model.cluster1022 - INFO - Child process started for cluster 1022 with 175 probes
2026-06-03 05:45:55,331 - cnv_pipe.batch.run_model.cluster1022 - INFO - Child process finished cluster 1022. Wrote cluster_1022_samples.csv and cluster_1022_params.csv
2026-06-03 05:45:55,334 - cnv_pipe.batch.run_model - INFO - Cluster 1022 finished in 323.07 seconds. Status: SUCCESS