mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-roochorv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:56,661 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:57,796 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:58,007 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:51,712 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:52,043 - cnv_pipe.batch.run_model - INFO - Processing cluster 960 with 172 probes
2026-06-03 05:39:52,571 - cnv_pipe.batch.run_model.cluster960 - INFO - Child process started for cluster 960 with 172 probes
2026-06-03 05:45:03,289 - cnv_pipe.batch.run_model.cluster960 - INFO - Child process finished cluster 960. Wrote cluster_960_samples.csv and cluster_960_params.csv
2026-06-03 05:45:03,291 - cnv_pipe.batch.run_model - INFO - Cluster 960 finished in 311.25 seconds. Status: SUCCESS