File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/3718faca76eaf07bc7cb72ff7b8525/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5jbq4zyc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:06,704 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:07,827 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:08,044 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:00,515 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:00,852 - cnv_pipe.batch.run_model - INFO - Processing cluster 772 with 195 probes
2026-06-03 05:39:01,394 - cnv_pipe.batch.run_model.cluster772 - INFO - Child process started for cluster 772 with 195 probes
2026-06-03 05:44:45,317 - cnv_pipe.batch.run_model.cluster772 - INFO - Child process finished cluster 772. Wrote cluster_772_samples.csv and cluster_772_params.csv
2026-06-03 05:44:45,320 - cnv_pipe.batch.run_model - INFO - Cluster 772 finished in 344.47 seconds. Status: SUCCESS