mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z04xe2tg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:11,897 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:13,003 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:13,207 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:03,128 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:03,484 - cnv_pipe.batch.run_model - INFO - Processing cluster 720 with 178 probes
2026-06-03 05:39:04,000 - cnv_pipe.batch.run_model.cluster720 - INFO - Child process started for cluster 720 with 178 probes
2026-06-03 05:44:28,828 - cnv_pipe.batch.run_model.cluster720 - INFO - Child process finished cluster 720. Wrote cluster_720_samples.csv and cluster_720_params.csv
2026-06-03 05:44:28,834 - cnv_pipe.batch.run_model - INFO - Cluster 720 finished in 325.35 seconds. Status: SUCCESS