mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-shmybo_h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:21,343 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:22,822 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:23,090 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:41,700 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:42,036 - cnv_pipe.batch.run_model - INFO - Processing cluster 818 with 129 probes
2026-06-03 05:39:42,803 - cnv_pipe.batch.run_model.cluster818 - INFO - Child process started for cluster 818 with 129 probes
2026-06-03 05:44:55,316 - cnv_pipe.batch.run_model.cluster818 - INFO - Child process finished cluster 818. Wrote cluster_818_samples.csv and cluster_818_params.csv
2026-06-03 05:44:55,318 - cnv_pipe.batch.run_model - INFO - Cluster 818 finished in 313.28 seconds. Status: SUCCESS