mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zxxfscdq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:35:16,485 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:17,306 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:17,480 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:36:04,505 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:36:04,770 - cnv_pipe.batch.run_model - INFO - Processing cluster 1 with 185 probes
2026-06-03 05:36:05,212 - cnv_pipe.batch.run_model.cluster1 - INFO - Child process started for cluster 1 with 185 probes
2026-06-03 05:41:49,033 - cnv_pipe.batch.run_model.cluster1 - INFO - Child process finished cluster 1. Wrote cluster_1_samples.csv and cluster_1_params.csv
2026-06-03 05:41:49,035 - cnv_pipe.batch.run_model - INFO - Cluster 1 finished in 344.27 seconds. Status: SUCCESS