mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ayor3njr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:37:42,062 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:37:43,168 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:37:43,366 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:38:35,541 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:38:35,862 - cnv_pipe.batch.run_model - INFO - Processing cluster 664 with 154 probes
2026-06-03 05:38:36,373 - cnv_pipe.batch.run_model.cluster664 - INFO - Child process started for cluster 664 with 154 probes
2026-06-03 05:43:22,920 - cnv_pipe.batch.run_model.cluster664 - INFO - Child process finished cluster 664. Wrote cluster_664_samples.csv and cluster_664_params.csv
2026-06-03 05:43:22,922 - cnv_pipe.batch.run_model - INFO - Cluster 664 finished in 287.06 seconds. Status: SUCCESS