File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c1/814937b0dce778af7b6af25160d3ad/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0txnapyv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:39:18,876 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:39:20,102 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:39:20,325 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:40:12,617 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:40:12,765 - cnv_pipe.batch.run_model - INFO - Processing cluster 1062 with 184 probes
2026-06-03 05:40:13,516 - cnv_pipe.batch.run_model.cluster1062 - INFO - Child process started for cluster 1062 with 184 probes
2026-06-03 05:45:26,039 - cnv_pipe.batch.run_model.cluster1062 - INFO - Child process finished cluster 1062. Wrote cluster_1062_samples.csv and cluster_1062_params.csv
2026-06-03 05:45:26,042 - cnv_pipe.batch.run_model - INFO - Cluster 1062 finished in 313.28 seconds. Status: SUCCESS